RegpreciseShellScriptAPI

namespace: SMRUCC.genomics.Analysis.Annotations.RegpreciseRegulations

Methods

BuildPWM

1
SMRUCC.genomics.Analysis.Annotations.RegpreciseRegulations.RegpreciseShellScriptAPI.BuildPWM(System.Boolean)

Build the pwm matrix model for the regulations sites in the regprecise database.
(构建meme的pwm模型并且保存于GCModeller的数据库之中)

Parameter Name Remarks
rebuildMatrix -

OrthologousFromOverview

1
SMRUCC.genomics.Analysis.Annotations.RegpreciseRegulations.RegpreciseShellScriptAPI.OrthologousFromOverview(System.String,System.String)

从blastp日志数据之中导出regprecise数据库的注释结果

Parameter Name Remarks
qvsPath @”M:SMRUCC.genomics.Interops.NCBI.Extensions.LocalBLAST.BLASTOutput.Views.Overview.LoadExcel(System.String)” 物种_vs_regprecise
svqPath regprecisevs物种