Alphabet

namespace: SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.SequenceLogo

Alphabet model in the drawing motif model, nt for 4 and aa for 20

Methods

CompareTo

1
SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.SequenceLogo.Alphabet.CompareTo(System.Object)

Sorts for the logo drawing

Parameter Name Remarks
obj -

Height

1
SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.SequenceLogo.Alphabet.Height(System.Double)

The height of letter a in column i Is given by
height = f(a,i) x R(i)

(该残基之中本类型的字母的绘制的高度)

Properties

Alphabet

A alphabet character which represents one residue.(可以代表本残基的字母值)

RelativeFrequency

The relative alphabet frequency at this site position.