Context

namespace: SMRUCC.genomics.ContextModel

Context model of a specific genomics feature site.

Methods

__relUnstrand

1
SMRUCC.genomics.ContextModel.Context.__relUnstrand(SMRUCC.genomics.ComponentModel.Loci.NucleotideLocation)

Get @”T:SMRUCC.genomics.ComponentModel.Loci.SegmentRelationships” ignored of nucleotide @”T:SMRUCC.genomics.ComponentModel.Loci.Strands”.

Parameter Name Remarks
loci -

GetRelation

1
SMRUCC.genomics.ContextModel.Context.GetRelation(SMRUCC.genomics.ComponentModel.Loci.NucleotideLocation,System.Boolean)

Get relationship between target @”T:SMRUCC.genomics.ComponentModel.Loci.NucleotideLocation” with current feature site.

Parameter Name Remarks
loci -
stranded Get @”T:SMRUCC.genomics.ComponentModel.Loci.SegmentRelationships” ignored of nucleotide @”T:SMRUCC.genomics.ComponentModel.Loci.Strands”?

ToString

1
SMRUCC.genomics.ContextModel.Context.ToString

Get tags data

Properties

Downstream

@”F:SMRUCC.genomics.ContextModel.Context.Feature” its downstream region with a specific length

Feature

Current feature site

Tag

The user custom tag data for this feature site.

Upstream

@”F:SMRUCC.genomics.ContextModel.Context.Feature” its upstream region with a specific length