GCModeller [version 1.0.0.0]

Module AssemblyName: file:///G:/GCModeller/manual/bin/PLAS.exe
Root namespace: PLAS.CLI

All of the command that available in this program has been list below:

Function API Info
Compile Compile a script file or sbml file into the plas model file.
Run run a model file of the biochemical network system.

Commands


Help for command ‘Compile’:

Prototype: PLAS.CLI::Int32 Compile(Microsoft.VisualBasic.CommandLine.CommandLine)

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Information:  Compile a script file or sbml file into the plas model file.
Usage: G:\GCModeller\manual\bin\PLAS.exe compile -i <file> -f <script/sbml> -o <output_file> [/auto-fix]
Example: PLAS Compile compile -i "/home/xieguigang/proj/metacyc/xcc8004/17.0/data/metabolic-reactions.sbml" -f sbml -o "/home/xieguigang/Desktop/xcc8004.xml"
Help for command ‘Run’:

Prototype: PLAS.CLI::Int32 Run(Microsoft.VisualBasic.CommandLine.CommandLine)

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Information:  run a model file of the biochemical network system.
Usage: G:\GCModeller\manual\bin\PLAS.exe run -i <model_file> -f <script/model/sbml> -chart <T/F> -o <output_csv>
Example: PLAS Run run -i "/home/xieguigang/proj/xcc8004.sbml" -f sbml -chart T -o "/home/xieguigang/Desktop/xcc8004.csv"

Parameters information:

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    -i
Description: The file path of the input model file that will be run on the PLAS program.

Example: -i "/home/xieguigang/proj/xcc8004.sbml"

-o
Description: The file path of the output data file for the calculation.

Example: -o "/home/xieguigang/Desktop/xcc8004.csv"

[-f]
Description: This parameter specific that the file format of the model file which will be run on the PLAS program.
script - The input file that specific by the switch parameter "-i" is a PLAS script file,
model - The input file is a compiled PLAS model, run it directly,
sbml - The input file is a sbml model file, it needs to be compiled to a PLAS model first.

Example: -f "model"

[-chart]
Description: Optional, This switch specific that PLAS displaying a chart windows after the calculation or not, default is F for not displaying.
T - (True) display a chart window after the calculation,
F - (False) not display a chart window after the calculation.

Example: -chart "/home/xieguigang/proj/xcc8004.sbml"

Accepted Types

-i
-o
-f
-chart